PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00021091-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family ERF
Protein Properties Length: 364aa    MW: 40852 Da    PI: 7.5286
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00021091-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.6e-18191240255
                 AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                          y+GVr +  +g+Wv+eIr+p++   + r++lg++ t+e+Aa+a++ a+++++g
  WALNUT_00021091-RA 191 LYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTYPTPEMAARAHDVAALSIKG 240
                         69****998.**********843...6***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008478.2E-13190240IPR001471AP2/ERF domain
CDDcd000181.91E-31190250No hitNo description
Gene3DG3DSA:3.30.730.103.6E-31191249IPR001471AP2/ERF domain
SuperFamilySSF541713.07E-21191249IPR016177DNA-binding domain
SMARTSM003802.3E-35191254IPR001471AP2/ERF domain
PROSITE profilePS5103223.354191248IPR001471AP2/ERF domain
PRINTSPR003671.0E-9192203IPR001471AP2/ERF domain
PRINTSPR003671.0E-9214230IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
MLGIMHSRLH VIKKNNSTME VRAHKQGETL RKLREEVTTL HEENASQRRA NGELDGGEHN  60
HHYESRRVLE DQMNIGLTFL TIVTFYCSEL NQEAKLALAI DGFLKASPSK QLVSFNSQQK  120
ATLSWPNKKK TIMDQWVTKT TSSEPQNSET ESSNSFCSNP ASPSSPQSSK PPSPDCRKDK  180
RIRNSTKKAP LYRGVRMRNW GKWVSEIREP RKKSRIWLGT YPTPEMAARA HDVAALSIKG  240
NSAILNFPEL AHLLPRPVSL APRDVQAAAA KAARMDNFDL TSPSLSSLVS AMDLSKESEE  300
LSELVELPSL GTNYESERLS KEFVFVDSVD CWGMYSQPWP QCVEDCGYPD ACDQLAVPEN  360
ESNN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A8e-171922481572Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018805746.11e-171PREDICTED: dehydration-responsive element-binding protein 3-like
TrEMBLA0A2I4DF211e-170A0A2I4DF21_JUGRE; dehydration-responsive element-binding protein 3-like
STRINGEOY297483e-79(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19234263
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.16e-51ERF family protein