PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00021676-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family ERF
Protein Properties Length: 403aa    MW: 45035.9 Da    PI: 4.5766
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00021676-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.63.6e-194594255
                 AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                        +y GVr+++ +grWvAeI+d      ++ r++lg+++taeeAa+a+++a+  l+g
  WALNUT_00021676-RA 45 RYIGVRQRP-SGRWVAEIKDtI----QKIRVWLGTYDTAEEAARAYDEAACLLRG 94
                        799******.7*********33....35**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.72E-3144101No hitNo description
SuperFamilySSF541711.44E-1945102IPR016177DNA-binding domain
SMARTSM003801.3E-3345108IPR001471AP2/ERF domain
PfamPF008472.5E-144594IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-2745101IPR001471AP2/ERF domain
PROSITE profilePS5103219.80945102IPR001471AP2/ERF domain
PRINTSPR003673.9E-84657IPR001471AP2/ERF domain
PRINTSPR003673.9E-86884IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    Send to blast
MVRKRKGSEW EEEEENSDRN MGLEQMMEEA AAVAALCGSR RNRKRYIGVR QRPSGRWVAE  60
IKDTIQKIRV WLGTYDTAEE AARAYDEAAC LLRGANTRTN FWPCSSSLHS APALPSKITN  120
LLLLRLKARQ IASASTTTSL PADFQEQETE VKDPHFDNFF NVLEDRTFYE SSGASSITTS  180
ENIAQSFASS FSGLEGDCVR ALDMVDNNKC TNVDGKSHGE GKDQEERDQE KEDFDMALID  240
LQFVDEVGSN CYCSPFEIAE EMVKPMEQEN HGDEPSILGE TMKRLMFERK FSASLYAFNG  300
IPECLMLKQS GLVANGTERS EQLSHHSNLR NNGNNTREDK KVTEENLHME VQEQVGSREK  360
SMEIGSSSSS FSSSSSSSSS SLITETGEPS LWSSLNLPPI CFI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018836812.10.0PREDICTED: uncharacterized protein LOC109003219
TrEMBLA0A2I4FYU10.0A0A2I4FYU1_JUGRE; uncharacterized protein LOC109003219
STRINGEOY035451e-112(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33383267
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-19related to AP2 11