PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00024200-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family bZIP
Protein Properties Length: 204aa    MW: 23807.2 Da    PI: 4.9806
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00024200-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.32.1e-1586144563
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                         +++rr+++NRe+ArrsR RK++ ++eL   v  L +eN+ L+++l + ++  +++ +e+
  WALNUT_00024200-RA  86 RKQRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENHHLIDRLHHVTESHDEVLQEN 144
                         79*********************************************999988887775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.5E-1782146IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.80684147IPR004827Basic-leucine zipper domain
PfamPF001701.0E-1386144IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.29E-1386136No hitNo description
Gene3DG3DSA:1.20.5.1701.8E-1386159No hitNo description
CDDcd147022.80E-2187138No hitNo description
PROSITE patternPS00036089104IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    Send to blast
MLPTEVTGIH YLAQETQIPT PVSYDMMQSN TNTPDLYFNR FLTSLPNFHF PNPQGHEFTP  60
QYSCISNNSS TSDEAEEHQL GIIDERKQRR MISNRESARR SRMRKQKHLD ELWSQVVRLR  120
TENHHLIDRL HHVTESHDEV LQENTRLKEE ASDLRQMLTH LQIDSPYSTT LRDLEEVIPS  180
NTADLGAESS DQSISNPEDL LYYD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
198105RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018842889.11e-150PREDICTED: basic leucine zipper 43-like
SwissprotQ9FMC25e-39BZP43_ARATH; Basic leucine zipper 43
TrEMBLA0A2I4GG741e-149A0A2I4GG74_JUGRE; basic leucine zipper 43-like
STRINGcassava4.1_022183m2e-82(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16043399
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.14e-48basic leucine-zipper 42
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]