PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00025182-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family NAC
Protein Properties Length: 165aa    MW: 19160.1 Da    PI: 9.7775
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00025182-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM170.65e-53151412128
                 NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                          pGfrFhPtdeelv +yLk+k+++++l++ e ik vdiyk++PwdLpk ++++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d+++
  WALNUT_00025182-RA  15 LPGFRFHPTDEELVGFYLKRKIQQRTLPI-ELIKPVDIYKYDPWDLPKVAATGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPI 104
                         69***************************.89***************8888999************************************* PP

                 NAM  93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         +s+ +++ +glkk+Lvfy+gra kg ktdW+mhe+rl
  WALNUT_00025182-RA 105 YSSdGSKCIGLKKSLVFYRGRAAKGIKTDWMMHEFRL 141
                         **966677***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.41E-5613145IPR003441NAC domain
PROSITE profilePS5100551.82514165IPR003441NAC domain
PfamPF023651.4E-2616141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    Send to blast
MDEKNDVEKV DDVILPGFRF HPTDEELVGF YLKRKIQQRT LPIELIKPVD IYKYDPWDLP  60
KVAATGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSDGS KCIGLKKSLV  120
FYRGRAAKGI KTDWMMHEFR LPSLSDLAPP KKFLDKNIPA NVSEI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-511614117140Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018850709.11e-116PREDICTED: protein FEZ-like
SwissprotQ9FIW59e-92NAC94_ARATH; Putative NAC domain-containing protein 94
TrEMBLA0A2I4H3K01e-115A0A2I4H3K0_JUGRE; protein FEZ-like
STRINGXP_009376262.11e-108(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20133490
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39820.16e-88NAC domain containing protein 94