PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00025928-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family Trihelix
Protein Properties Length: 285aa    MW: 32184.4 Da    PI: 10.1786
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00025928-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix45.32.3e-1440130186
            trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergfe.....rspkqCkekwenlnkrykkikegekkrtsessstcpyfdq 84 
                         +Wt++ +++L++a  ++  +l+rg+l +++W+ev++++  r    +     rs +qCk++++ l+k++k +k++  +     +s++p+f  
  WALNUT_00025928-RA  40 CWTEEATHTLLDAWGDRYVQLNRGNLGQKQWQEVADAVnaR--HAHfpnslRSDVQCKNRIDTLKKKFKIEKARVFQSCGSYVSSWPFFAL 128
                         8*************************************652..433334449**********************99986677899****98 PP

            trihelix  85 le 86 
                         l+
  WALNUT_00025928-RA 129 LD 130
                         87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.1E-2338132No hitNo description
Gene3DG3DSA:1.10.10.604.2E-440106IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MHSAQLTPHS DSYAISKQRR TSLASMDPSL APPCPAREDC WTEEATHTLL DAWGDRYVQL  60
NRGNLGQKQW QEVADAVNAR HAHFPNSLRS DVQCKNRIDT LKKKFKIEKA RVFQSCGSYV  120
SSWPFFALLD ALIGSTFPKS SSPVAVGNRK TPPTASQAWN LSSPVPVGPR THKRPPPAGH  180
SRRNFLVFSA AEGEGSEDLR GSIGTESEGG RVRSGGYREL AQAIERFGEI YERVEWVKQR  240
QMIELEKQKM QFAKDLECHR MQLLLETQVQ LQKMKRARRS GERHS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00413DAPTransfer from AT3G58630Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018810840.10.0PREDICTED: trihelix transcription factor ASIL2-like isoform X2
TrEMBLA0A2I4DUL70.0A0A2I4DUL7_JUGRE; trihelix transcription factor ASIL2-like isoform X2
STRINGXP_010104393.12e-92(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18873379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.11e-73sequence-specific DNA binding transcription factors