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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
WALNUT_00025961-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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| Family |
GRAS |
| Protein Properties |
Length: 457aa MW: 51209.3 Da PI: 5.7197 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| WALNUT_00025961-RA | genome | JHU | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 306.8 | 4.9e-94 | 52 | 453 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.....sseelaalkl..fs 85
++lL++cA+a++s+d++laq++L+ l+++a+pdgd++qRl+ f++AL ar a+ ++ +k l++ +++++n ++ ++ l f+
WALNUT_00025961-RA 52 EQLLVHCANAIESNDATLAQQILWVLNNIATPDGDSNQRLTCGFLRALIARAAK--TGSCKMLAAMANAHSNiaidtHKFSIIE--LasFV 138
79****************************************************..5555556555555555444223333333..366** PP
GRAS 86 evsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelg 173
+++P+++f++ +aN aIleaveg + +Hi+D+++++++Q p+L++a+a+R e pp +++T+ s+e + ++ee+g++L +fA++ +
WALNUT_00025961-RA 139 DLTPWHRFGFTAANAAILEAVEGYSIIHIVDLSLTHCMQIPTLIDAIANRHEVPPLVKLTVATSMEDVppkLDLSYEELGSKLVNFARSKN 229
****************************************************************998897777899*************** PP
GRAS 174 vpfefnvl...vakrledleleeLrvkp......gEalaVnlvlqlhrll..................desvsleserdevLklvkslsPk 237
v +ef+v + + +++l +e+Lrv++ gEal++n++++lh+++ + s +++s r+ +Lk ++sl P+
WALNUT_00025961-RA 230 VMMEFRVSpssYKDGFATL-IEQLRVQHlvypesGEALVINCQMMLHYIPeetvnvaipsansnpydfECSSTTSSFRTMFLKSLRSLDPT 319
******9777633334444.66666665666669********************************997778888889************* PP
GRAS 238 vvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvp 328
+vv+v+++ad++s++ + r+ +a++y + +d++++ lp+ s++r+++E+ + ++i+nv+a+eg++r+er et ++W +r+++a F+ ++
WALNUT_00025961-RA 320 IVVLVDEDADLTSNDVVSRLRSAFNYLWIPYDTMDTFLPTGSKQRQWYEAN-ICWKIENVIANEGFHRVERPETRSQWVQRMRNADFRGIS 409
***************************************************.*************************************** PP
GRAS 329 lsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
++e+a++++k++l +++ g+ +++e++ lvl+Wk++++v+++aW
WALNUT_00025961-RA 410 FGEDAVSEVKTMLDEHA-AGWGLKKEEDNLVLTWKGHNVVFATAW 453
*****************.8999*********************** PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 457 aa
Download sequence Send
to blast |
MQFTEAPPQS LHQMTPFSNP TMNKSQFHRT RPWPGFPTSK SLGSFGDANC MEQLLVHCAN 60 AIESNDATLA QQILWVLNNI ATPDGDSNQR LTCGFLRALI ARAAKTGSCK MLAAMANAHS 120 NIAIDTHKFS IIELASFVDL TPWHRFGFTA ANAAILEAVE GYSIIHIVDL SLTHCMQIPT 180 LIDAIANRHE VPPLVKLTVA TSMEDVPPKL DLSYEELGSK LVNFARSKNV MMEFRVSPSS 240 YKDGFATLIE QLRVQHLVYP ESGEALVINC QMMLHYIPEE TVNVAIPSAN SNPYDFECSS 300 TTSSFRTMFL KSLRSLDPTI VVLVDEDADL TSNDVVSRLR SAFNYLWIPY DTMDTFLPTG 360 SKQRQWYEAN ICWKIENVIA NEGFHRVERP ETRSQWVQRM RNADFRGISF GEDAVSEVKT 420 MLDEHAAGWG LKKEEDNLVL TWKGHNVVFA TAWLPAA
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |