PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00027482-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family ERF
Protein Properties Length: 245aa    MW: 27265.6 Da    PI: 8.1519
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00027482-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.31.4e-1653102255
                 AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                         +y GVr+++ +grWvAeI+d      ++ r +lg+f++aeeAa a++ a++ l+g
  WALNUT_00027482-RA  53 RYLGVRQRP-SGRWVAEIKD----SlQKLRLWLGTFDSAEEAALAYDSAARLLRG 102
                         588******.7*********....4456***********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.73E-3153110No hitNo description
Gene3DG3DSA:3.30.730.102.2E-2853110IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-2053111IPR016177DNA-binding domain
SMARTSM003803.6E-3353116IPR001471AP2/ERF domain
PROSITE profilePS5103220.52153110IPR001471AP2/ERF domain
PfamPF008471.0E-1054102IPR001471AP2/ERF domain
PRINTSPR003679.3E-85465IPR001471AP2/ERF domain
PRINTSPR003679.3E-87692IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MDMISLVISG TPSEPQNACQ NHAPTPLEIE GIHANEEKGS MELPKRRKSN GGRYLGVRQR  60
PSGRWVAEIK DSLQKLRLWL GTFDSAEEAA LAYDSAARLL RGKNAKTNFP CHHGVVSTHE  120
ESYRSLEKNP RLFRLLQHAI MKNHARSIIF REDQIHGDKV DSSSFDALVE ETIVCNSSSS  180
SESGICDMYD HDRNKLSQLS VGSSKVYSSV FVAPSFSSSR CQVGEDRKDC QLRGLSNGIS  240
HSPYK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A8e-16521171379Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018858077.10.0PREDICTED: ethylene-responsive transcription factor LEP-like
TrEMBLA0A2I4HPL70.0A0A2I4HPL7_JUGRE; ethylene-responsive transcription factor LEP-like
STRINGVIT_17s0000g04480.t019e-73(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF123492734
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.15e-16related to AP2 11