PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00027704-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family WRKY
Protein Properties Length: 143aa    MW: 16249.1 Da    PI: 5.6019
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00027704-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY35.32.3e-11123143222
                         --SS-EEEEEEE--TT-SS-E CS
                WRKY   2 dDgynWrKYGqKevkgsefpr 22 
                         dDgy+WrKYGqK +k+s++pr
  WALNUT_00027704-RA 123 DDGYKWRKYGQKAIKNSPNPR 143
                         8*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.2E-10117143IPR003657WRKY domain
PROSITE profilePS5081113.104117143IPR003657WRKY domain
SuperFamilySSF1182901.7E-8120143IPR003657WRKY domain
PfamPF031062.4E-7123143IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    Send to blast
MAAMWTTDRL EDELVRELLD NQSPFFVLPA EKISSGTEPN TGSTTHDPYL QHEEAVNRLM  60
ISNVYSGPTI EDIENVLSLT TSEDQPHQEL SSQARISLLE RGINKVEHKY TLRIKNHGNA  120
IADDGYKWRK YGQKAIKNSP NPR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018809851.11e-101PREDICTED: probable WRKY transcription factor 49
RefseqXP_018811057.11e-104PREDICTED: probable WRKY transcription factor 49
TrEMBLA0A2I4DRT51e-100A0A2I4DRT5_JUGRE; probable WRKY transcription factor 49
TrEMBLA0A2I4DV871e-102A0A2I4DV87_JUGRE; probable WRKY transcription factor 49
STRINGXP_008369986.11e-47(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF71183449
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43290.12e-26WRKY DNA-binding protein 49