PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00028482-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family WRKY
Protein Properties Length: 464aa    MW: 49731.1 Da    PI: 4.844
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00028482-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.77.6e-31243301259
                         --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                         +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  WALNUT_00028482-RA 243 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 301
                         699************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081132.925237303IPR003657WRKY domain
Gene3DG3DSA:2.20.25.807.4E-31239303IPR003657WRKY domain
SuperFamilySSF1182903.27E-26240303IPR003657WRKY domain
SMARTSM007741.4E-37242302IPR003657WRKY domain
PfamPF031061.0E-25244301IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 464 aa     Download sequence    Send to blast
MYCSLFMPRM ENYQGDLTDI VRASGGAYGT GAAGASEPSP GWRFPSDPMN FLSVVEEPRD  60
NFGDPFSYMR DPLLNELDVS GSSFFSSTSS AEMMGSSTAA SVEDTGGFNG GNTTGAVVGV  120
GGGSTSTILA PSNYLEDEMK RPCNIFSRML QISPNAKLPV SPCGSPVMAA AASPRGIKAS  180
AMIAGDMITA NSPNGCFIDN TGVQISSPRN PGIKRRKSQA KKVVCIPAPA AVNSRPTGEV  240
VPSDLWAWRK YGQKPIKGSP YPRGYYRCSS SKGCSARKQV ERSRTDPNML VITYTSEHNH  300
PWPTQRNALA GSTRSQPSKS NAASRNFQGA QSQKPTSPKE EQKESSIDDH VSPIVCGSST  360
TSASVKEELD EVEKQVLEID DGEFSTAEEF SYRPTMPGSN LQSDQDFFAE LEEIEADPLD  420
LLFSQGFAGD HAQKDSKGMD PFSLFDWPGD GGTNSFGEAK NRGL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B1e-25217304280Disease resistance protein RRS1
5w3x_D1e-25217304280Disease resistance protein RRS1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00171DAPTransfer from AT1G30650Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018817753.10.0PREDICTED: LOW QUALITY PROTEIN: probable WRKY transcription factor 14
TrEMBLA0A2I4EED80.0A0A2I4EED8_JUGRE; LOW QUALITY PROTEIN: probable WRKY transcription factor 14
STRINGPOPTR_0001s46490.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54303454
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30650.12e-95WRKY DNA-binding protein 14