PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00028685-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family bZIP
Protein Properties Length: 259aa    MW: 28100.3 Da    PI: 7.6382
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00028685-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.47.3e-1481128350
                         XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                         +lkr +r+ +NRe+ArrsR++K+ +++ Le  v++L++eN++L k+  
  WALNUT_00028685-RA  81 KLKRLKRMNSNRESARRSREKKQLQLQDLELQVDKLKGENTSLCKQFT 128
                         79*****************************************98765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.6E-1176133No hitNo description
SMARTSM003385.6E-1279143IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.41581133IPR004827Basic-leucine zipper domain
PfamPF001701.4E-1181128IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.14E-1182135No hitNo description
CDDcd147024.63E-1284135No hitNo description
PROSITE patternPS00036086101IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MNGLTETLVG SPNLTFKQSS ISATMESQSS ICVSSPMSAN KPEGRDAQAR VATSTGSSHE  60
PSDDDVDLEA GQCEQSTDVA KLKRLKRMNS NRESARRSRE KKQLQLQDLE LQVDKLKGEN  120
TSLCKQFTDA NRQYHVADTN NRVLKSDVEA LRAKVKLAED MVTRGSLTTS SLSLYQLLQS  180
HLGTPPPLNT HNLRRVPNVS PTITVYGDET SFAGNGMAVS GQNSAFGLGH TNITNGNLKT  240
GIMSDVHVIN DQGHANVLF
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by glucose. {ECO:0000269|PubMed:18841482}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018856962.10.0PREDICTED: basic leucine zipper 9-like isoform X1
SwissprotQ9FUD35e-64BZIP9_ARATH; Basic leucine zipper 9
TrEMBLA0A2I4HLI70.0A0A2I4HLI7_JUGRE; basic leucine zipper 9-like isoform X1
STRINGXP_004291263.15e-85(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41953458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.19e-38basic leucine zipper 9
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Ortiz-Espín A, et al.
    Mitochondrial AtTrxo1 is transcriptionally regulated by AtbZIP9 and AtAZF2 and affects seed germination under saline conditions.
    J. Exp. Bot., 2017. 68(5): p. 1025-1038
    [PMID:28184497]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  4. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]