PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00029221-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family MYB_related
Protein Properties Length: 68aa    MW: 7609.61 Da    PI: 10.9457
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00029221-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.41.2e-111250140
                        TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS
     Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40
                        +g+W++eEde l ++v+  G ++W  I++ +  gR++k+c
  WALNUT_00029221-RA 12 KGPWSPEEDEMLRKLVQGKGARSWYVISKAIA-GRSGKSC 50
                        79******************************.******9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.72E-11650IPR009057Homeodomain-like
PROSITE profilePS5129412.837768IPR017930Myb domain
SMARTSM007171.5E-41160IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.2E-131150IPR009057Homeodomain-like
PfamPF002497.5E-111250IPR001005SANT/Myb domain
CDDcd001677.97E-91450No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 68 aa     Download sequence    Send to blast
MEASQRDVDR VKGPWSPEED EMLRKLVQGK GARSWYVISK AIAGRSGKSC GFVGATNFHR  60
RWSTGPSR
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018827388.16e-25PREDICTED: transcription factor MYB44-like
SwissprotO231608e-15MYB73_ARATH; Transcription factor MYB73
TrEMBLA0A2I4F6X71e-23A0A2I4F6X7_JUGRE; transcription factor MYB44-like
STRINGEMJ004983e-17(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23290.11e-17myb domain protein 70
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]