PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00029735-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family BBR-BPC
Protein Properties Length: 259aa    MW: 28265.3 Da    PI: 10.213
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00029735-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind214.21.2e-6512381259
           GAGA_bind   1 mdddgsre.rnkgyyepaaslkenlglqlmssiaerdakirernlalsekkaavaerd.........maflqrdkalaernkalverdnkl 81 
                         md d+s   r++gyyepa   +++lglqlmssi+e+      + +a+++ ++a+++rd         m+f  rd+++++        ++++
  WALNUT_00029735-RA   1 MDGDNSLRmRHWGYYEPA---RSHLGLQLMSSIPEKPLIGGRNAVAMASGNGAFQHRDlgvshsgfpMEF-VRDAWINQ--------RERY 79 
                         888888778*********...99***********999999999999************************.99*****9........6778 PP

           GAGA_bind  82 lalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkkse 172
                         +++l+          +g++ l++t+s++++++     +   + +l++eek+ +    e++  +ke+   kkr+  k pk++k+kk+k+ ++
  WALNUT_00029735-RA  80 INVLPG--------YPGYGGLPETSSAHHVDM-----VL--PPDLPKEEKTVSA---EETGIEKENGPIKKRRAVKAPKSPKEKKTKRAPR 152
                         898883........3689**************.....22..3334444433333...4678889999999999999******999999666 PP

           GAGA_bind 173 kskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrK 259
                          +k   +  sa++ + a+kk++++++ngv++D+s++P+PvCsCtG+++qCY+WG+GGWqSaCCtt++S+yPLP+stkrrgaRiag  
  WALNUT_00029735-RA 153 PPKT-GSGTSAPRARTATKKTTEIAINGVDMDISGIPIPVCSCTGTPQQCYRWGSGGWQSACCTTAMSMYPLPMSTKRRGARIAGNF 238
                         6644.44455566777899*****************************************************************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF062172.9E-741237IPR010409GAGA-binding transcriptional activator
SMARTSM012265.5E-941241IPR010409GAGA-binding transcriptional activator
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MDGDNSLRMR HWGYYEPARS HLGLQLMSSI PEKPLIGGRN AVAMASGNGA FQHRDLGVSH  60
SGFPMEFVRD AWINQRERYI NVLPGYPGYG GLPETSSAHH VDMVLPPDLP KEEKTVSAEE  120
TGIEKENGPI KKRRAVKAPK SPKEKKTKRA PRPPKTGSGT SAPRARTATK KTTEIAINGV  180
DMDISGIPIP VCSCTGTPQQ CYRWGSGGWQ SACCTTAMSM YPLPMSTKRR GARIAGNFNS  240
KEKGCNAKCI GFLQQKFSS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018808019.11e-176PREDICTED: protein BASIC PENTACYSTEINE2-like
RefseqXP_018808020.11e-176PREDICTED: protein BASIC PENTACYSTEINE2-like
TrEMBLA0A2I4DLJ51e-175A0A2I4DLJ5_JUGRE; protein BASIC PENTACYSTEINE2-like
STRINGGLYMA09G30040.41e-109(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF23703283
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.39e-48basic pentacysteine 2