PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00030593-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family NAC
Protein Properties Length: 136aa    MW: 15998 Da    PI: 5.5967
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00030593-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM45.91.7e-14131156128
                 NAM   6 rFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                         r + t +e+ + +Lk    +++++  +vi+ev+ + +eP++Lp       + wyf  ++++k +     n   + g+Wka+g+  +++s +
  WALNUT_00030593-RA  13 RLDCTHKEIFSSFLKMT--RSQFPG-NVITEVNPFLWEPSNLP-------EGWYFIPSEENKDT-----N---NFGFWKAKGEACKIYS-N 84 
                         55668889999999655..455556.78**************9.......68999888877653.....3...46**************.9 PP

                 NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                         +  +g  +t+ f+ +++  g+ktdW+++eyr+
  WALNUT_00030593-RA  85 SVITGWSTTFEFF-EDHTYGHKTDWMIQEYRM 115
                         99***********.688899**********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100518.578135IPR003441NAC domain
PfamPF023651.3E-813115IPR003441NAC domain
SuperFamilySSF1019415.23E-1626121IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    Send to blast
MFPSAATALG DLRLDCTHKE IFSSFLKMTR SQFPGNVITE VNPFLWEPSN LPEGWYFIPS  60
EENKDTNNFG FWKAKGEACK IYSNSVITGW STTFEFFEDH TYGHKTDWMI QEYRMVQGKP  120
YESNKAQVFY GIHWYY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018855400.16e-92PREDICTED: NAC domain-containing protein 79-like
TrEMBLA0A2I4HGV81e-90A0A2I4HGV8_JUGRE; NAC domain-containing protein 79-like
STRINGPOPTR_0014s04080.17e-35(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF105882235
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.13e-09NAC-domain protein 101