PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004487149.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family AP2
Protein Properties Length: 469aa    MW: 51785.4 Da    PI: 8.5517
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004487149.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.33.3e-17142191155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  XP_004487149.1 142 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 191
                     78*******************......55************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.1E-9142191IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-16142199IPR016177DNA-binding domain
CDDcd000182.35E-11143198No hitNo description
PROSITE profilePS5103217.82143199IPR001471AP2/ERF domain
SMARTSM003803.0E-31143205IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.2E-17143199IPR001471AP2/ERF domain
CDDcd000189.18E-14234279No hitNo description
SuperFamilySSF541711.77E-6234278IPR016177DNA-binding domain
SMARTSM003808.9E-14235283IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 469 aa     Download sequence    Send to blast
MLDLNLNADS TQNDDSPVLF EKIPEASSGT SNSSIVNADA SSSGAGTGTG DEESGSTRAG  60
EAYTFNFGIL KVEDGNDVVA TKELFPVSVR NLQGQSLAMM FPTRKSEMDL TLDHHGGENG  120
IVQVQQRPQV KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR  180
AYDRAAIKFR GLDADINFNL VEYEEDMKQM KNLSKEEFVH ILRRHSNGFS RGSSKYRGVT  240
LHKCGRWEAR MGQLLGKKAY DKAAIKCNGR DAVTNFEPST YENEMKTESI NEGGSDSHNL  300
DLNLGIATPR HEPKENRAYH QFQAVPHNMH LGRSSKMEIK ANSVIGDQSL KRMVVTEEHP  360
STWNHATYSS FFSNEGRRAE RIGIDPSKGL PNWAWQAHGQ GQGSTASPVQ QFSSAASSGF  420
SISATFPSSS IFQTQPLNSI PHTLCFAPSI APGSYASQYY YQVKSSQAP
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Regulates negatively the transition to flowering time and confers flowering time delay. {ECO:0000250, ECO:0000269|PubMed:14555699}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004487149.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by miR172a-2/EAT. {ECO:0000269|PubMed:14555699}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004487149.10.0ethylene-responsive transcription factor RAP2-7-like isoform X2
SwissprotQ9SK031e-106RAP27_ARATH; Ethylene-responsive transcription factor RAP2-7
TrEMBLA0A1S2XCE40.0A0A1S2XCE4_CICAR; ethylene-responsive transcription factor RAP2-7-like isoform X2
STRINGXP_004487148.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.11e-100related to AP2.7