PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004490443.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 249aa    MW: 27938.6 Da    PI: 8.7179
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004490443.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.71.8e-123683254
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    +++h e+ErrRR+riN  +++Lr+llP+       K +Ka+ L ++v+++k L
  XP_004490443.1 36 CKSHREAERRRRQRINAHLSTLRSLLPNT-----IKSDKASLLAEVVQHVKRL 83
                    789*************************8.....69**************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.4533483IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.6E-103683IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.05E-123791IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.0E-133786IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.2E-114089IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2605.5E-5145196No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MLPFRRFYGL ESWLDKDSEK INGERSKSER KSTEACKSHR EAERRRRQRI NAHLSTLRSL  60
LPNTIKSDKA SLLAEVVQHV KRLKKEAGDV ANRYNDIESS SSCSGEPGSV NSLERAEAWP  120
FPGESDEATV SYYSGEEGEP RRMKATVCCE DRPGLNRDLI QAIRSVRAKA VRAEMMTVGG  180
RTKSVVVVQW AKSDAIGEEV GMLERGLKAV IEDRAFLGSG MGPIFLGHKR VRDSTEVDCS  240
LLLKNEDFY
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004490443.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004490443.10.0transcription factor bHLH30-like
TrEMBLA0A1S2XJW40.0A0A1S2XJW4_CICAR; transcription factor bHLH30-like
STRINGXP_004490443.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF114412834
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.12e-32bHLH family protein