PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004491946.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 332aa    MW: 37189.7 Da    PI: 4.8044
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004491946.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH56.26.1e-1853102255
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r +h+e E+rRR++iN++f+ Lr+l+P++    ++K +Ka+ L +++eYI+ Lq
  XP_004491946.1  53 RSKHSETEQRRRSKINERFQVLRDLIPQN----DQKRDKASFLLEVIEYIQFLQ 102
                     899*************************9....9*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.102.8E-2449125IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-2051130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.29551101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.08E-1653106No hitNo description
PfamPF000102.5E-1553102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.3E-1357107IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MARSAKGNRD EDLVDDDDEQ DLFTSNTSSS LNINNNNVKG DEPSRGKRAN THRSKHSETE  60
QRRRSKINER FQVLRDLIPQ NDQKRDKASF LLEVIEYIQF LQEKLQIYEQ SYEGWNQEPT  120
KLTPWRNHHG PADNTTDPSR AIQNGSVREK NNNVSPSLPK NIQNSIDSDL STTIEKGHTL  180
GLAGEAVPMT MQMRLDMFDP VVSSGIVSQQ MPELPLSNAD KDDYIVADNT LKEQEELTSE  240
SGSDSISNAY SQRILGTLTQ TLQSSGVDLS QASVSVQVDV GRRTDTRLTS SPYGSKGHEN  300
PFASDRAMAC SGIDYFSEDS ELSPKRFRRE AS
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004491946.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311271e-150KT031127.1 Glycine max clone HN_CCL_217 bHLH transcription factor (Glyma18g51080.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004491946.10.0transcription factor BIM2-like isoform X2
TrEMBLA0A1S2XN800.0A0A1S2XN80_CICAR; transcription factor BIM2-like isoform X2
STRINGXP_004491945.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.12e-61BES1-interacting Myc-like protein 2