PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004492996.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family NAC
Protein Properties Length: 197aa    MW: 23475.3 Da    PI: 8.7802
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004492996.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM86.16.6e-27171431128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                     lp+G+rF+Ptd+ lv++yLkkkv + +l+  ++i ++d++++ePw Lp  ++a +++++yfF  r+++    +   r + +g W++  k+ e+  
  XP_004492996.1  17 LPVGYRFDPTDDVLVCFYLKKKVYNLTLPY-HAILDFDVFQTEPWLLPGDLNAfKDRRYYFFDIRQREFD--NMDIRPAGNGEWRTIEKNMELDL 108
                     799***************************.88***************6555547789999999999875..478888899************** PP

             NAM  95 kkgelvglkktLvfy.kgrapkgektdWvmheyrl 128
                      ++  vg k+tLvf+ k++ ++   t+W+mhe+rl
  XP_004492996.1 109 PSQFFVGKKNTLVFWwKKQGNQHIMTRWMMHEFRL 143
                     99999*********96667777889********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-3114149IPR003441NAC domain
PROSITE profilePS5100532.36217163IPR003441NAC domain
PfamPF023652.3E-1618143IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    Send to blast
MALDFLAEFD QPDCRRLPVG YRFDPTDDVL VCFYLKKKVY NLTLPYHAIL DFDVFQTEPW  60
LLPGDLNAFK DRRYYFFDIR QREFDNMDIR PAGNGEWRTI EKNMELDLPS QFFVGKKNTL  120
VFWWKKQGNQ HIMTRWMMHE FRLTTVIQPT KISAVGAYRI FKRKLEKPLR NNIIRPVVID  180
FTMEDATACP PPPPMSP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A9e-181714315140Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004492996.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004492996.11e-146NAC domain-containing protein 83
TrEMBLA0A1S2XRW61e-144A0A1S2XRW6_CICAR; NAC domain-containing protein 83
STRINGXP_004492996.11e-145(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF134131127
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.23e-23NAC domain containing protein 47