PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004493961.2
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family NAC
Protein Properties Length: 365aa    MW: 41943.1 Da    PI: 7.1166
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004493961.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM164.63.4e-51471741128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhP+deel+v+yL++kv++++l++ ++i+e+d+yk++Pw+Lp+k+  +++ewyfF++rd+ky++g r+nra+ +gyWkatg+dk+++++
  XP_004493961.2  47 LPPGFRFHPSDEELIVHYLRNKVTSSPLPA-SFIAEIDLYKYNPWELPSKALFGDEEWYFFTPRDRKYPKGLRPNRAAGAGYWKATGTDKPIFTS 140
                     79****************************.89***************8777899**************************************99 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      + + +g+kk+Lvfykgr  kg+kt+W+mheyrl
  XP_004493961.2 141 yGLKSIGVKKSLVFYKGRPLKGSKTEWIMHEYRL 174
                     78889***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.09E-6242201IPR003441NAC domain
PROSITE profilePS5100559.92747201IPR003441NAC domain
PfamPF023652.5E-2748174IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    Send to blast
MHSDCKYTTI LIDNIGNSSL HFLVSYVDFN NTFIFMDKKN HHSEIQLPPG FRFHPSDEEL  60
IVHYLRNKVT SSPLPASFIA EIDLYKYNPW ELPSKALFGD EEWYFFTPRD RKYPKGLRPN  120
RAAGAGYWKA TGTDKPIFTS YGLKSIGVKK SLVFYKGRPL KGSKTEWIMH EYRLHDSIIS  180
NSNHSGSMRL DEWVLCRVRQ KTGSPRSSCE DSNELSFETS SHFQQMNDNS SPEPVKNYVQ  240
KQNEYPMLPY ILASKSVLPN SIGMSSNNEK SHASLYENNL NIIGAQFLSS AAEGLFNPQK  300
RKAVEENIEM DFYAVLNKNL SREVDDVNQR LEIDLSKGYN SYNFDQWTSI IQPQELNSLA  360
FTGYT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A5e-654320416171NAC domain-containing protein 19
3swm_B5e-654320416171NAC domain-containing protein 19
3swm_C5e-654320416171NAC domain-containing protein 19
3swm_D5e-654320416171NAC domain-containing protein 19
3swp_A5e-654320416171NAC domain-containing protein 19
3swp_B5e-654320416171NAC domain-containing protein 19
3swp_C5e-654320416171NAC domain-containing protein 19
3swp_D5e-654320416171NAC domain-containing protein 19
3ulx_A4e-65382016168Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004493961.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1286381e-125AC128638.34 Medicago truncatula clone mth2-36h10, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004493961.20.0NAC transcription factor 32
TrEMBLA0A1S2XSR20.0A0A1S2XSR2_CICAR; NAC transcription factor 32
STRINGXP_004493961.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24162981
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.14e-80NAC-like, activated by AP3/PI