PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004494833.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 170aa    MW: 18875.1 Da    PI: 6.1199
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004494833.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2574.7e-182676155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + y+GVr ++ +g+Wv+eIr+p++   + r++lg+f  +e+Aa+a++ a+ +l+g
  XP_004494833.1 26 PVYRGVRKRR-WGKWVSEIREPKK---KSRIWLGSFSVPEMAARAYDVAAYCLKG 76
                    68*****887.**********854...6*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.2E-112676IPR001471AP2/ERF domain
SuperFamilySSF541711.77E-212786IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.108.7E-322785IPR001471AP2/ERF domain
SMARTSM003801.6E-362790IPR001471AP2/ERF domain
PROSITE profilePS5103223.4852784IPR001471AP2/ERF domain
PRINTSPR003679.1E-132839IPR001471AP2/ERF domain
CDDcd000186.68E-312885No hitNo description
PRINTSPR003679.1E-136686IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MDNQPTPFTE HDVTATDSRK TGTRHPVYRG VRKRRWGKWV SEIREPKKKS RIWLGSFSVP  60
EMAARAYDVA AYCLKGRKAQ LNFPDEVEQL PLPATCTARD IQAAASKAAS MVKASPGEKS  120
DGDSGGDDFW GEIELPELMG SECCWNSHSE SSWTCSGDVT VWPEVELSAH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-191886574Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00120DAPTransfer from AT1G01250Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004494833.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004494833.11e-125ethylene-responsive transcription factor ERF023-like
SwissprotQ1ECI22e-54ERF23_ARATH; Ethylene-responsive transcription factor ERF023
TrEMBLA0A1S2XW411e-123A0A1S2XW41_CICAR; ethylene-responsive transcription factor ERF023-like
STRINGXP_004494833.11e-124(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF63752847
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01250.19e-52ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]