PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004495268.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family C2H2
Protein Properties Length: 168aa    MW: 19130.4 Da    PI: 10.5452
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004495268.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.0002788108323
                     ETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                     C +Cgk Fs    L  H+r+H
  XP_004495268.1  88 CYICGKEFSVGQALGGHMRRH 108
                     99******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003550.563860IPR015880Zinc finger, C2H2-like
PfamPF139126.7E-103862IPR007087Zinc finger, C2H2
SuperFamilySSF576672.04E-738108No hitNo description
PROSITE profilePS501579.8893865IPR007087Zinc finger, C2H2
PROSITE patternPS0002804060IPR007087Zinc finger, C2H2
SMARTSM003554.886108IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.45286108IPR007087Zinc finger, C2H2
PfamPF139121.5E-886109IPR007087Zinc finger, C2H2
PROSITE patternPS00028088108IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    Send to blast
MKRQRNEEVE NINLANCLIL LSHPKESKYK KHFGPTEFEC ITCNRKFSSF QALGGHRASH  60
KKPKLDTTEL KVQAQTLSLW NKPKMHGCYI CGKEFSVGQA LGGHMRRHRI ALNEGVSKKK  120
KIVGEVPILK RSNSKKVMCL DLNLTPLHND LNLLFGNMPP KVHTLFNT
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004495268.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004495268.11e-122zinc finger protein ZAT11-like
TrEMBLA0A1S2XX231e-121A0A1S2XX23_CICAR; zinc finger protein ZAT11-like
STRINGXP_004495268.11e-122(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF31634175
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.12e-44C2H2 family protein