PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004495294.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 339aa    MW: 36898.6 Da    PI: 4.9035
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004495294.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.73.7e-07211252955
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +r RR+ri + +  L ellP++     +  s a +L   ++Y+k+Lq
  XP_004495294.1 211 DRERRQRIADNLKALHELLPNP-----EEGSQAYVLDDIIDYVKYLQ 252
                     79*******************9.....789****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.07E-11200265IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.28202251IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.4E-10206264IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.0041210257IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.0E-4210252IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.58E-6212256No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MEGEISSNKD NSIYDDTGGG GGGGGTSQGN DVSEDNLIPN QQFVITGRSG AHWTCLPKPS  60
HNNNYVEYLS ESSTYLPNTA TNEYVNIIGG NYQTLGGGNR VSGKDRDSFY NDHGKAFGFK  120
PVDSSANDFG IGKRVGYWRP DEVEEAIKVA TGSSQDLTYA EGHAAWKADS VGDKHNASKF  180
DPMGKVGAPS FLPKSGGSSS NQKSNKTRYT DRERRQRIAD NLKALHELLP NPEEGSQAYV  240
LDDIIDYVKY LQHQIKELSG SKLQADSNAI PLVFHEGYGH YIKQQMLDEP LEEIMGKLLE  300
EHSAAANQLL ENKGLFLMPI ALVDELSQAI QLFGGSSLG
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004495294.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004495294.10.0transcription factor bHLH83
TrEMBLA0A1S2XXP90.0A0A1S2XXP9_CICAR; transcription factor bHLH83
STRINGXP_004495294.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF121642426
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30980.14e-21LJRHL1-like 2