PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004496086.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 225aa    MW: 25604.8 Da    PI: 8.0741
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004496086.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.84.7e-17136186255
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrd    + k  r++lg+f ++ +Aaka++ a+ +++g
  XP_004496086.1 136 HYRGVRRRP-WGKFAAEIRDsT--R-KGSRVWLGTFNSEIDAAKAYDCAAFRMRG 186
                     7********.**********32..2.24**********99*************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.104.6E-30135195IPR001471AP2/ERF domain
CDDcd000181.95E-27136194No hitNo description
PROSITE profilePS5103222.972136194IPR001471AP2/ERF domain
SMARTSM003805.0E-34136200IPR001471AP2/ERF domain
PfamPF008471.3E-12136186IPR001471AP2/ERF domain
SuperFamilySSF541711.9E-21136195IPR016177DNA-binding domain
PRINTSPR003675.1E-13137148IPR001471AP2/ERF domain
PRINTSPR003675.1E-13176196IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009409Biological Processresponse to cold
GO:0009414Biological Processresponse to water deprivation
GO:0009723Biological Processresponse to ethylene
GO:0009737Biological Processresponse to abscisic acid
GO:1902074Biological Processresponse to salt
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MLVFHLKFNL LSPILSIKKN INMTTSKETS SLKLLSQHLL EDNISESFFT NLNSVKLEYP  60
SSEIDLDPYF SEQNSFYSFL ESFGFEADTQ VVVDFNSEVQ NSNAESSLEE TKNISNSAEP  120
MVLEKKELQT CYGERHYRGV RRRPWGKFAA EIRDSTRKGS RVWLGTFNSE IDAAKAYDCA  180
AFRMRGQKAI LNFPLEAGEA NPKPNNSVCG RKRRIHHRNV ATSSS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-28135195161ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004496086.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004496086.11e-167ethylene-responsive transcription factor ERF107
TrEMBLA0A1S2XYW51e-166A0A1S2XYW5_CICAR; ethylene-responsive transcription factor ERF107
STRINGXP_004496086.11e-167(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF52573056
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.14e-38ERF family protein