PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004496817.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 118aa    MW: 13278 Da    PI: 6.2331
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004496817.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.44.9e-15243348
             AP2  3 ykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaia 48
                    y GVr ++ +g+++AeIr  +     +  r++lg+f taeeAa a++ 
  XP_004496817.1  2 YLGVRKRP-WGKYAAEIRNpF-----TkERHWLGTFNTAEEAAIAYDI 43
                    67******.**********66.....34******************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003802.1E-26165IPR001471AP2/ERF domain
PROSITE profilePS5103219.322159IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-18260IPR016177DNA-binding domain
PRINTSPR003674.6E-9213IPR001471AP2/ERF domain
CDDcd000187.29E-27258No hitNo description
Gene3DG3DSA:3.30.730.102.3E-25259IPR001471AP2/ERF domain
PfamPF008472.5E-8442IPR001471AP2/ERF domain
PRINTSPR003674.6E-92440IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    Send to blast
MYLGVRKRPW GKYAAEIRNP FTKERHWLGT FNTAEEAAIA YDISSINICG IHNARTNFHY  60
PFLSNYFQPP LFLPPPPPPP VSELDTISNL KTNVDVDDES LVIASILQSF SCSGSYSL
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004496817.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004496817.15e-84ethylene-responsive transcription factor LEP-like
SwissprotQ3E7036e-25ERF88_ARATH; Ethylene-responsive transcription factor ERF088
TrEMBLA0A1S2XZ421e-82A0A1S2XZ42_CICAR; ethylene-responsive transcription factor LEP-like
STRINGXP_004496817.12e-83(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF145131317
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12890.12e-27ERF family protein