PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004498014.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 256aa    MW: 29647.5 Da    PI: 8.3744
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004498014.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH185.1e-0697143455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h + Er RR+r +++  +L ++lP+      +K +  ++++ A + I+ Lq
  XP_004498014.1  97 KHMISERMRRQRQRQCCLNLHSVLPHG-----TKTDNNSVVQTAAKEIQRLQ 143
                     68899*********************8.....79999999999999999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.76E-1085153IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.3693142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.7E-797159IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.1E-499148IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
MNHFFPEKLL GEVFFDEPLS STNQSNFVHA QQQPYSTQNP SAFVQYRDQP IISFGEESSL  60
KGSNSNSMNK RMVAFLRKKV ALERNKAVEC ERERGYKHMI SERMRRQRQR QCCLNLHSVL  120
PHGTKTDNNS VVQTAAKEIQ RLQRCQEELE RKNFELESNV VDGRKFKYLR VPNPTSGIDS  180
IVETLKCLKG HGVDTRSIKS NFSKKELFAA LELENEIAGS DVERTIQRTL DELERKLHSH  240
VPECPNKQII EYEEFG
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004498014.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004498014.10.0transcription factor bHLH92 isoform X1
TrEMBLA0A1S2Y3120.0A0A1S2Y312_CICAR; transcription factor bHLH92 isoform X1
STRINGXP_004498014.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF125722734
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.13e-29bHLH family protein