PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_004498959.1

Organism

Cicer arietinum

Taxonomic ID

3827

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer

Family

bZIP

Protein Properties

Length: 145aa MW: 16897.3 Da PI: 9.6546

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_004498959.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.2	2.3e-10	60	109	5	54
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 ++ rr+q+NRe+ArrsR RKk +e+L+ L eN++Lk++l + XP_004498959.1 60 RKLRRMQSNRESARRSRWRKKRHVENLTSDLNRLRLENRELKNRLGLTMN 109 5789**************************************99876554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	4.4E-12	56	120	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.99	58	104	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	5.8E-8	60	111	No hit	No description
Pfam	PF00170	6.5E-9	60	105	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	6.11E-11	60	114	No hit	No description
CDD	cd14702	1.48E-14	61	108	No hit	No description
PROSITE pattern	PS00036	0	63	78	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 145 aa Download sequence Send to blast
MSFHEEKIPV RFGCLPVHET MFTQGELEEL FSLINQPVDP TSPGSGSQGS NQAVYSIPER 60 KLRRMQSNRE SARRSRWRKK RHVENLTSDL NRLRLENREL KNRLGLTMNY NLLLSTENQC 120 LKSESMSLIV TLLDLYRTLE TMISQ

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_004498959.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004498959.1	1e-103	basic leucine zipper 4
TrEMBL	A0A1S2Y5R4	1e-101	A0A1S2Y5R4_CICAR; basic leucine zipper 4
STRING	XP_004498959.1	1e-102	(Cicer arietinum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF5996	30	52

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49760.1	5e-11	basic leucine-zipper 5