PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004500239.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family C2H2
Protein Properties Length: 395aa    MW: 43969.8 Da    PI: 8.5585
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004500239.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.98e-05158181123
                     EEETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                     ++C+ Cg+ F  + +L++H++t H
  XP_004500239.1 158 FPCTACGEIFQKPNLLEQHQSTnH 181
                     89*******************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.972158186IPR007087Zinc finger, C2H2
PROSITE patternPS000280160181IPR007087Zinc finger, C2H2
SuperFamilySSF563994.7E-14184394No hitNo description
Gene3DG3DSA:3.90.228.102.8E-5184298IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene3DG3DSA:3.90.228.107.5E-6328394IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    Send to blast
MASIATFFNK FHYLFILIVH LGCFFTTTAT SAAGKQDSHH LLSSKKRKIS PLSQPSSPSH  60
PKFKTNKALS SSWHFIKHLF STKSCKTATA TSTTNSSPQS TSTVTAAATL TTARSSQQSL  120
ISSVQPDSNF QDSPRKKQPE SDISADNNLF FPLRNDIFPC TACGEIFQKP NLLEQHQSTN  180
HAVSELTGSD PGHNIVQIIF KSGWPETREF PTIHRILKIH NSQKILSKFE EYRETVKSKA  240
ARHTRRRDER CIADGNELMR FHCSTFLCEL GLNGDSSICS QQFCNICGVI KSGFSPKLDG  300
ISTLSTSWRG HVSIPDEIER EFRFMNVKRA MLVCRVIAGR VGSDSDDGEL DKSDGGFDSV  360
MARGENGVYT RLDEEELLVF NPRAVLPCFV IVYSV
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004500239.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004500239.10.0uncharacterized protein LOC101489748
TrEMBLA0A1S2Y7U50.0A0A1S2Y7U5_CICAR; uncharacterized protein LOC101489748
STRINGXP_004500239.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106682936
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29660.11e-105C2H2 family protein