PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_004500440.1

Organism

Cicer arietinum

Taxonomic ID

3827

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer

Family

bZIP

Protein Properties

Length: 256aa MW: 29874 Da PI: 5.1919

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_004500440.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	29.2	2e-09	76	121	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 k+ r+++ R+A++rsR+RKk++ ++Le kv e+ea+ +Lk++l+ XP_004500440.1 76 KKIRKLMLKRLASKRSRLRKKMYEANLEMKVREIEAQIVELKSQLQ 121 899999999*********************************9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	3.9E-6	70	123	No hit	No description
SuperFamily	SSF57959	3.38E-5	76	129	No hit	No description
CDD	cd14686	1.85E-8	77	121	No hit	No description
Pfam	PF07716	1.1E-5	85	121	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence Send to blast
MEGNIPATFS HMNPSKPSLS PTNSLFQAHM RVVNTPTNGA LWGATTDIDD FGSKFNQAEP 60 SRVNLGLNCD QDMDPKKIRK LMLKRLASKR SRLRKKMYEA NLEMKVREIE AQIVELKSQL 120 QVQPNHKRLL VLEQELLTHR INIVEQEMFL KEAVTEELMA QTNVLNELYA MQHEPQEQML 180 DWNINNNVEP ISYDPMENYY SNPYNQDTEL PLQRQMLTPT LPTDEYETNV IDQPNNKSMG 240 MMEIKWHPHF NNDQFI

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_004500440.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004500440.1	0.0	uncharacterized protein LOC101503209
TrEMBL	A0A1S2Y715	0.0	A0A1S2Y715_CICAR; uncharacterized protein LOC101503209
STRING	XP_004500440.1	0.0	(Cicer arietinum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF18156	3	4