PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004501557.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 160aa    MW: 18430.6 Da    PI: 9.4291
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004501557.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.28.3e-183180255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y+G+r +k +g+WvAeIr+p   +kr r++lg++ t+  Aa+a++ a  +l+g
  XP_004501557.1 31 PYRGIRKRK-WGKWVAEIREP---NKRSRIWLGSYITPVAAARAYDTAVFYLRG 80
                    69****999.**********9...336*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103222.3133188IPR001471AP2/ERF domain
SMARTSM003804.0E-363194IPR001471AP2/ERF domain
SuperFamilySSF541714.32E-203189IPR016177DNA-binding domain
CDDcd000182.11E-273290No hitNo description
PRINTSPR003674.4E-123243IPR001471AP2/ERF domain
PfamPF008472.0E-103280IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.8E-303289IPR001471AP2/ERF domain
PRINTSPR003674.4E-127090IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0009414Biological Processresponse to water deprivation
GO:0042538Biological Processhyperosmotic salinity response
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0001078Molecular Functiontranscriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    Send to blast
MEQERDCCST IIRNRTNNNN AQEKHKQQEK PYRGIRKRKW GKWVAEIREP NKRSRIWLGS  60
YITPVAAARA YDTAVFYLRG PSARLNFPEL LFQDDEENNG DDGSVQQGDM SADLIRKKAT  120
RVGARVDALQ TALQDSTRST STQFMSHVKP DLNEYPKPED
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-153088463ATERF1
3gcc_A4e-153088463ATERF1
5wx9_A6e-1532891573Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00188DAPTransfer from AT1G46768Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004501557.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004501557.11e-118ethylene-responsive transcription factor RAP2-1-like
SwissprotQ8LC309e-52RAP21_ARATH; Ethylene-responsive transcription factor RAP2-1
TrEMBLA0A1S2Y9L61e-117A0A1S2Y9L6_CICAR; ethylene-responsive transcription factor RAP2-1-like
STRINGXP_004501557.11e-118(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF129032106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46768.14e-53related to AP2 1
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]