PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004502873.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family WRKY
Protein Properties Length: 204aa    MW: 23431.7 Da    PI: 5.6644
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004502873.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY887.8e-28113171159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +dDgy+WrKYG+K+vk+s++ r+YY+C+s+gC+vkk+ver+++d ++v + Y g Hnhe
  XP_004502873.1 113 MDDGYKWRKYGKKSVKNSPYQRNYYKCSSEGCSVKKRVERDSKDSSYVLTSYDGVHNHE 171
                     59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.6E-3099173IPR003657WRKY domain
SuperFamilySSF1182903.4E-26105173IPR003657WRKY domain
PROSITE profilePS5081129.459108173IPR003657WRKY domain
SMARTSM007742.0E-30113172IPR003657WRKY domain
PfamPF031067.5E-22114171IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009867Biological Processjasmonic acid mediated signaling pathway
GO:0042742Biological Processdefense response to bacterium
GO:0050832Biological Processdefense response to fungus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    Send to blast
MDMMDFGNPN PNPSYQSFSA PLPSSDFILS DYLVLDDVVD HHQESWSQST ETESSEKAAS  60
IDVIQGFSDE TSMNNSNMIL KRCKREIKEN NSNKVEEVKE RVTFRTRSQV EIMDDGYKWR  120
KYGKKSVKNS PYQRNYYKCS SEGCSVKKRV ERDSKDSSYV LTSYDGVHNH ESPSTSYYTT  180
PPVSTLLYSN EWILNHASTN SSSY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-25101173274WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004502873.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004502873.11e-150probable WRKY transcription factor 43
TrEMBLA0A1S2YE221e-149A0A1S2YE22_CICAR; probable WRKY transcription factor 43
STRINGXP_004502873.11e-150(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF112034110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.14e-36WRKY DNA-binding protein 51