PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004504192.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family GATA
Protein Properties Length: 159aa    MW: 18009.3 Da    PI: 9.6954
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004504192.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA46.16.6e-15738132
            GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrk 32
                    Cs+Cg  + p+WR+gp+ ++ LCnaCG+++++
  XP_004504192.1  7 CSHCGIVSAPHWRQGPEEKPVLCNACGIRFKH 38
                    ****************99999*********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004016.5E-7160IPR000679Zinc finger, GATA-type
SuperFamilySSF577161.19E-10556No hitNo description
CDDcd002025.20E-10640No hitNo description
PROSITE profilePS5011410.699740IPR000679Zinc finger, GATA-type
PfamPF003205.2E-12738IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.101.2E-11740IPR013088Zinc finger, NHR/GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    Send to blast
MAKKGPCSHC GIVSAPHWRQ GPEEKPVLCN ACGIRFKHWG NLHNYTPKHC VPNNLNNHKL  60
VKDNGNTSSN VPDEDSDNGG KNSSNSWIYS KRRSQKGYKK MTPIQKFQKQ LFDEWRYHGK  120
AKEEDVLLFQ NMNNFIPSNE IGLGAILLKP TEDASSTSR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004504192.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004504192.11e-117GATA transcription factor 26-like
TrEMBLA0A1S2YGK11e-116A0A1S2YGK1_CICAR; GATA transcription factor 26-like
STRINGXP_004504192.11e-117(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF127471024
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47140.17e-19GATA transcription factor 27