PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004505183.2
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family G2-like
Protein Properties Length: 410aa    MW: 45726 Da    PI: 6.435
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004505183.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like97.21.2e-30269323156
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                     k+r++W+peLH+rFv+a+++LGGs+ AtPk+i+elm+v+gLt+++vkSHLQkYRl+
  XP_004505183.2 269 KQRRCWSPELHRRFVSALQKLGGSQ-ATPKQIRELMQVDGLTNDEVKSHLQKYRLH 323
                     79*******************9987.****************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129415.259266325IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.7E-29266326IPR009057Homeodomain-like
SuperFamilySSF466891.55E-18266326IPR009057Homeodomain-like
TIGRFAMsTIGR015571.9E-26269323IPR006447Myb domain, plants
PfamPF002495.0E-8271321IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    Send to blast
MGSLPSELTL DLRPTFLPKT ISDFLLDLSS IQPTSDKLSK LHDFLSRLED ELKKIDAFKR  60
ELPLCMFLLN DAILVLKEEL EKCRVQNSLP VLEEFIPLKK EIDQSEENNN DDDDNNNNEC  120
RDKMNWMSSV QLWNNNNTTT NNNASDQKHN HNKLETKKME EEEQSVTVAE EPIFQPCSSN  180
RNGGSAFMPF STYSSVPVTT VTLAAPKQEK EDTVINRLSL LTPGMKSLRE GFGSRGSRGS  240
SSRAVSSSPP TVHPSLRAGP LQPQQTSRKQ RRCWSPELHR RFVSALQKLG GSQATPKQIR  300
ELMQVDGLTN DEVKSHLQKY RLHTRRGPAS SSNQSVVVLG GLWMSQEQYN ESSKGSSSAS  360
GSPQSPLHLA TGSRGGTSPT EDDSLEDDED AKSENYSWKS HIQRPGKVGV
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004505183.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004505183.20.0myb family transcription factor EFM isoform X2
TrEMBLA0A1S2YIW90.0A0A1S2YIW9_CICAR; myb family transcription factor EFM isoform X2
STRINGXP_004505182.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37180.11e-43G2-like family protein