PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004505414.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 253aa    MW: 29013.8 Da    PI: 7.5365
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004505414.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH331.1e-105197555
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    h  +Er RR+++++ ++ L +llP++   p  K + ++iL +Av+ I++Lq
  XP_004505414.1 51 HLWIERERRKKMRNMYDILHSLLPHL---P-SKADSSTILDEAVKQIQNLQ 97
                    6669*********************7...4.67788**************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.6144696IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-1449124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-1349110IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.97E-94998No hitNo description
PfamPF000106.4E-85197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-752102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MNVDDDDDVA VFMQENESWS PSNSDETRRE EVNKKRSREE VASKNVTDSN HLWIERERRK  60
KMRNMYDILH SLLPHLPSKA DSSTILDEAV KQIQNLQQTL KKLEKQKQEK LKSIYQFRCE  120
SSTINSQRHP YKSREVFISG EGSSSSNSVN AFSTPRPTVA FQSWYSSNVV LNICGDEAQF  180
CICATRKPGL LTTVAFVMEK HSIALIYANI FCNGIGYMIQ AHVKRVSHEF QDAIILAEET  240
YKQAAEEIKK LIS
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004505414.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004505414.10.0transcription factor bHLH95-like
TrEMBLA0A1S2YJE60.0A0A1S2YJE6_CICAR; transcription factor bHLH95-like
STRINGXP_004505414.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47733358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.11e-15bHLH family protein