PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004506043.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family TALE
Protein Properties Length: 668aa    MW: 74943.2 Da    PI: 6.7327
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004506043.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox291.8e-094935301954
                     HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     Fe   ++yp+ +++  LA+++gL+ +qV++WF N R +
  XP_004506043.1 493 FEHflHPYPTDTDKHMLATQTGLSRNQVSNWFINARVR 530
                     665559******************************87 PP
2BELL98.65e-32342412272
            BELL   2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                     r e qk ka+Ll +++eV +r+kqy++q+q+v+ssFe vagl sa+pY+slAlk +S+hF++Lk+ i++q+
  XP_004506043.1 342 RPECQKNKAQLLFMQQEVSRRHKQYHQQMQMVVSSFESVAGLSSATPYISLALKSLSKHFKSLKNSITDQL 412
                     5689****************************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005741.0E-40260410IPR006563POX domain
PfamPF075269.7E-38265409IPR006563POX domain
PROSITE profilePS5007111.985471534IPR001356Homeobox domain
SMARTSM003892.4E-8474538IPR001356Homeobox domain
CDDcd000865.37E-11474535No hitNo description
SuperFamilySSF466896.42E-17476540IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.2E-27477538IPR009057Homeodomain-like
PfamPF059203.0E-18491530IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010076Biological Processmaintenance of floral meristem identity
GO:0010077Biological Processmaintenance of inflorescence meristem identity
GO:0010223Biological Processsecondary shoot formation
GO:0010228Biological Processvegetative to reproductive phase transition of meristem
GO:0010229Biological Processinflorescence development
GO:0048645Biological Processorgan formation
GO:0080006Biological Processinternode patterning
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 668 aa     Download sequence    Send to blast
MSSLRPELHV AQQIRRDKLR FQNHFQDNNM EQLLSLHQVA QPGFNLDLLQ LRNNNNNMVV  60
DDDDDDDDEA QIYSSQMINS FSTSPQYASF HHSSSKQQQS HQISDNWTIN SSSYNYHPNE  120
TNFLPSHLHN HSNSNSSLQD IATSSITPHS LMQHSIWGGV NSHNATITTM SPFHENQANL  180
WTNRGVVENM GTFLSDCNPH QGLSLSLSSQ SKLPSPSSFE QGSSNMMKTL IHQEPIIIGT  240
TTSNSSNSSY RSVGPLGPFT GYATILKSSR FLKPCQELLE ECCGCRQSGP KWVSRDVVVD  300
DENGVCGSNS GSMLLYGSKE KENSVADADA GNSFCLSSSS SRPECQKNKA QLLFMQQEVS  360
RRHKQYHQQM QMVVSSFESV AGLSSATPYI SLALKSLSKH FKSLKNSITD QLKITCQVLG  420
EDFSILPPTI TSSSSKIDSS NNVTRIRCMN HSIQKNYSGG NSNVDFVEPQ QHVWRPQRGL  480
PERSVAILKA WLFEHFLHPY PTDTDKHMLA TQTGLSRNQV SNWFINARVR VWKPMVEEIH  540
MLESKGITES ENNSTKNEAS RGVGRNGMAE KEFQCMEMGS SSSTGINNVE NDKEQWNNIK  600
EKRSKLENEI TENMDTTTVM GGFMPYQRGS VSLTLGLRHG VENVQQQLQH EVELRHQFGG  660
HMIHDFVG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A7e-15480538563Homeobox protein Meis2
3k2a_B7e-15480538563Homeobox protein Meis2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004506043.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004506043.10.0BEL1-like homeodomain protein 8
RefseqXP_004506044.10.0BEL1-like homeodomain protein 8
RefseqXP_027191359.10.0BEL1-like homeodomain protein 8
TrEMBLA0A1S2YKJ20.0A0A1S2YKJ2_CICAR; BEL1-like homeodomain protein 8
STRINGXP_004506043.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF34813257
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27990.13e-82BEL1-like homeodomain 8