PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004506261.2
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family MYB_related
Protein Properties Length: 129aa    MW: 15064.9 Da    PI: 10.4362
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004506261.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.81.9e-1663106347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       WT+eE+el++++ +++ +g Wk Ia+++g +Rt  q+ s+ qk+
   XP_004506261.2  63 HWTEEEHELFLQGLRLYNKGEWKNIAKHVG-TRTSTQVASHAQKH 106
                      6*****************************.************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.5E-1355110IPR009057Homeodomain-like
PROSITE profilePS5129420.87155111IPR017930Myb domain
SuperFamilySSF466898.97E-1758110IPR009057Homeodomain-like
TIGRFAMsTIGR015579.0E-1459110IPR006447Myb domain, plants
SMARTSM007174.9E-1360109IPR001005SANT/Myb domain
PfamPF002492.2E-1463106IPR001005SANT/Myb domain
CDDcd001677.34E-1364107No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    Send to blast
MHMSSSRPNQ SLSPFQQSHF NYPNSINRNP IDVEFPTCSD YNANLANQNK ASPPKKEKKK  60
VKHWTEEEHE LFLQGLRLYN KGEWKNIAKH VGTRTSTQVA SHAQKHFNRQ TLTPEKRKRK  120
SIYDMTLGE
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004506261.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004506261.33e-93transcription factor DIVARICATA-like
SwissprotQ8S9H72e-20DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A1S2YKR07e-92A0A1S2YKR0_CICAR; transcription factor DIVARICATA-like
STRINGXP_004506261.11e-92(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1935635
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09450.19e-18MYB_related family protein
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]