PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004506301.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 199aa    MW: 22762.9 Da    PI: 7.595
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004506301.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.41.9e-11657255
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                    +  h+e Er+RR+++ +   +Lr+llP       ++K s ++ + +A++YI++Lq
  XP_004506301.1  6 KLIHKETERQRRQEMATLCTTLRSLLPLeY---IKGKRSISDHVYEAMNYINHLQ 57
                    556*************************77...*********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.05E-10261No hitNo description
SuperFamilySSF474594.06E-14373IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.874456IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.0E-9672IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-8757IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.00231062IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MEENKKLIHK ETERQRRQEM ATLCTTLRSL LPLEYIKGKR SISDHVYEAM NYINHLQNNV  60
KQLQSKKEEL MKISNLSTKA PQNGSSSNSS TTHLSPFVIV QPFLGGLEIV CSYSFNKCLF  120
PLSKALDLLI KEGLNVISTN SNNLDGRFIY TVRLEDPIMR SIDYSELQTK LIEAISSSSL  180
QESTSEHENS QYFHNNVIF
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004506301.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004506301.11e-145transcription factor bHLH118-like
TrEMBLA0A1S2YKU81e-143A0A1S2YKU8_CICAR; transcription factor bHLH118-like
STRINGXP_004506301.11e-144(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF79233125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.11e-34bHLH family protein