PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_004506915.1

Organism

Cicer arietinum

Taxonomic ID

3827

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer

Family

G2-like

Protein Properties

Length: 149aa MW: 17455.8 Da PI: 9.0653

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_004506915.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	72.2	7.7e-23	89	138	2	52
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52 r Wt++LH++Fv +v++L G e+A Pk+il++m+v+gLt+eh++SHLQ+ XP_004506915.1 89 FRWSWTQQLHNQFVTVVNEL-GLENAKPKKILKIMDVPGLTREHIASHLQQ 138 5899**************.9**************************6 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:3.40.50.2300	7.3E-5	1	46	No hit	No description
Gene3D	G3DSA:1.10.10.60	1.8E-22	87	138	IPR009057	Homeodomain-like
SuperFamily	SSF46689	6.09E-15	87	143	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.9E-18	89	138	IPR006447	Myb domain, plants
Pfam	PF00249	1.1E-6	92	138	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 149 aa Download sequence Send to blast
MSSHYSTNSV TEAITKGASD YWIKPLEERD FQTMWKHVVK GLIINENQNM NGIFHINNKR 60 GREQVDVPKQ TIDENHSHND DYPSPAKKFR WSWTQQLHNQ FVTVVNELGL ENAKPKKILK 120 IMDVPGLTRE HIASHLQQRV SWFKFVDCI

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_004506915.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004506915.1	1e-109	two-component response regulator ARR10-like
TrEMBL	A0A1S2YM81	1e-108	A0A1S2YM81_CICAR; two-component response regulator ARR10-like
STRING	XP_004506915.1	1e-109	(Cicer arietinum)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	8e-24	response regulator 2