PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004508803.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 206aa    MW: 22744.6 Da    PI: 8.9127
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004508803.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.92.7e-06110136430
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC CS
             HLH   4 ahnerErrRRdriNsafeeLrellPka 30 
                     +h+ +Er RR++i  ++  L++l+P +
  XP_004508803.1 110 SHSLAERARREKISVRMKILQDLVPGC 136
                     8************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000837.45E-5104145No hitNo description
SuperFamilySSF474591.2E-7104140IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.248106157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.2E-7109143IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    Send to blast
MEAPLVNDST FSSTNPSLSE IWPFPLHHSY YNSHFSPQQY NNNNNNECGS GTTKHIKLGS  60
SVSDDKKATS IAAQQEEKQN AKPSCDVAVP VPPKQDYIHV RARRGQATDS HSLAERARRE  120
KISVRMKILQ DLVPGCNKFL SMKLEALNSR FNMHPAIDCF PSKEVGAQPF DLSGIIFGPQ  180
AGRGYAQGSQ PGWLHMQIAG GFNKSM
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004508803.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0993333e-39BT099333.1 Soybean clone JCVI-FLGm-16N18 unknown mRNA.
GenBankKT0311243e-39KT031124.1 Glycine max clone HN_CCL_216 bHLH transcription factor (Glyma17g10290.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004508803.11e-155transcription factor BHLH089 isoform X2
SwissprotQ69WS34e-46BH094_ORYSJ; Transcription factor BHLH094
TrEMBLA0A1S2YRK61e-154A0A1S2YRK6_CICAR; transcription factor BHLH089 isoform X2
STRINGXP_004508802.11e-144(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.14e-48BIG PETAL P