PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004509590.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family MYB_related
Protein Properties Length: 799aa    MW: 88218.4 Da    PI: 6.9686
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004509590.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.56.2e-085597347
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +WT +E+e +  a +q G++ +++I ++++  +   q++++++ +
   XP_004509590.1 55 AWTRQEEESFFTALRQVGKN-FEKITSRVQ-SKNKDQVRHYYYRL 97
                     6*****************99.*********.***********976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.02E-1048102IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.6E-550100IPR009057Homeodomain-like
PROSITE profilePS5129313.41651102IPR017884SANT domain
SMARTSM007172.7E-652100IPR001005SANT/Myb domain
CDDcd001677.33E-65598No hitNo description
PfamPF002495.6E-65597IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 799 aa     Download sequence    Send to blast
MQDEAQILID LNTQLHSETV VSVQNEDPGV SSSLVNAVIM SQQPVLKKPT RQWAAWTRQE  60
EESFFTALRQ VGKNFEKITS RVQSKNKDQV RHYYYRLVRR MNKLLGPGLC LDAKNSKDTN  120
AAMLRWWSLL EKYSCKASKL HLKPRRFKIF LEALEHQLLK DRKKNVRKRP LQGGNCQPSA  180
LNAVSNQARG SGNDTRAVKM ILVDSQNIIK LGPSKPPLKR NVNMGVNRSN AKGDSNNSKP  240
TRQRKKSGIA TSAAYRKWEK AAIAGVSLVA DAAEHLERAA TVKDVEHGQE NPGEKCSEPV  300
DQVLSSLPTF PPNHFVDNNV QNIMKLKLQL FPIDEPTRRA LEMDKHNPYL ELTLSTRKKI  360
SSILEHLNRK WGNSSIAIGE LVLFPYGVQK ENLNNYQRWN QESTLSAADI YAVIGSPPIF  420
RLRYGWFSNT KHGALNMQAP VASSCLARQS KNGGDNMKDQ IVNLASLPIP STNNYSTECA  480
VDCGTSLIKT GALTTTSTYL SNARDDSTYQ NTSTEEPCGP TAFISLHGKD VTDGAVTRKL  540
EDMDDLKSNS GSGVSAGEWA DSLTNISVGD LLLGVSQNLD DNCINPLIGE NCHSVHQIPF  600
SSDSFDAAIA AHISKHQDKI GQSTMASHMS SIWDAEETRD AFSFKKDPIL HENGPCLSFI  660
VSLDSDKKVP GRSFENLDKL SPEKESLVDD IAQTDPMAMD SCESDADIQY QLAKDLTGLA  720
DMYWPDSLGP LDLNIPSTKY DGGDLILSDS LSGLNRLIAS SLDAFQNCSF FGIDKKETPS  780
TVEAQETATF SDFKIGSGI
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004509590.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2358919e-95AC235891.2 Glycine max clone GM_WBc0069F21, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004509590.10.0TSL-kinase interacting protein 1 isoform X2
SwissprotQ8LJT80.0TKI1_ARATH; TSL-kinase interacting protein 1
TrEMBLA0A1S2YTC70.0A0A1S2YTC7_CICAR; TSL-kinase interacting protein 1 isoform X2
STRINGXP_004509588.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36960.20.0TSL-kinase interacting protein 1