PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004509591.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family MYB_related
Protein Properties Length: 797aa    MW: 88048.2 Da    PI: 6.9686
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004509591.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.56.2e-085597347
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +WT +E+e +  a +q G++ +++I ++++  +   q++++++ +
   XP_004509591.1 55 AWTRQEEESFFTALRQVGKN-FEKITSRVQ-SKNKDQVRHYYYRL 97
                     6*****************99.*********.***********976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.94E-1048102IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.6E-550100IPR009057Homeodomain-like
PROSITE profilePS5129313.41651102IPR017884SANT domain
SMARTSM007172.7E-652100IPR001005SANT/Myb domain
PfamPF002495.6E-65597IPR001005SANT/Myb domain
CDDcd001677.30E-65598No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 797 aa     Download sequence    Send to blast
MQDEAQILID LNTQLHSETV VSVQNEDPGV SSSLVNAVIM SQQPVLKKPT RQWAAWTRQE  60
EESFFTALRQ VGKNFEKITS RVQSKNKDQV RHYYYRLVRR MNKLLGPGLC LDAKNSKDTN  120
AAMLRWWSLL EKYSCKASKL HLKPRRFKIF LEALEHQLLK DRKKNVRKRP LQGGNCQPSA  180
LNAVSNQARG SGNDTRAVKM ILVDSQNIIK LGPSKPPLKR NVNMGVNRSN AKGDSNNSKP  240
TRQRKKSATS AAYRKWEKAA IAGVSLVADA AEHLERAATV KDVEHGQENP GEKCSEPVDQ  300
VLSSLPTFPP NHFVDNNVQN IMKLKLQLFP IDEPTRRALE MDKHNPYLEL TLSTRKKISS  360
ILEHLNRKWG NSSIAIGELV LFPYGVQKEN LNNYQRWNQE STLSAADIYA VIGSPPIFRL  420
RYGWFSNTKH GALNMQAPVA SSCLARQSKN GGDNMKDQIV NLASLPIPST NNYSTECAVD  480
CGTSLIKTGA LTTTSTYLSN ARDDSTYQNT STEEPCGPTA FISLHGKDVT DGAVTRKLED  540
MDDLKSNSGS GVSAGEWADS LTNISVGDLL LGVSQNLDDN CINPLIGENC HSVHQIPFSS  600
DSFDAAIAAH ISKHQDKIGQ STMASHMSSI WDAEETRDAF SFKKDPILHE NGPCLSFIVS  660
LDSDKKVPGR SFENLDKLSP EKESLVDDIA QTDPMAMDSC ESDADIQYQL AKDLTGLADM  720
YWPDSLGPLD LNIPSTKYDG GDLILSDSLS GLNRLIASSL DAFQNCSFFG IDKKETPSTV  780
EAQETATFSD FKIGSGI
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004509591.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2358919e-95AC235891.2 Glycine max clone GM_WBc0069F21, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004509591.10.0TSL-kinase interacting protein 1 isoform X3
SwissprotQ8LJT80.0TKI1_ARATH; TSL-kinase interacting protein 1
TrEMBLA0A1S2YTE20.0A0A1S2YTE2_CICAR; TSL-kinase interacting protein 1 isoform X3
STRINGXP_004509588.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36960.20.0TSL-kinase interacting protein 1