PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004510113.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 210aa    MW: 23511.1 Da    PI: 9.1436
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004510113.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.67.4e-1969118255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr +  +g+Wv+eIr+p++   + r++lg++ tae+Aa+a++ a+++++g
  XP_004510113.1  69 TYRGVRMRN-WGKWVCEIREPRK---KSRIWLGTYPTAEMAARAHDVAALAIKG 118
                     69****998.**********843...6***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103223.19669126IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-3269127IPR001471AP2/ERF domain
SMARTSM003802.6E-3569132IPR001471AP2/ERF domain
SuperFamilySSF541712.48E-2269127IPR016177DNA-binding domain
PfamPF008471.0E-1369118IPR001471AP2/ERF domain
CDDcd000185.34E-3170126No hitNo description
PRINTSPR003671.5E-107081IPR001471AP2/ERF domain
PRINTSPR003671.5E-1092108IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MESDGGDCNS TSTLSFSSST TTTTTTSSSN SDTCRKQYSK ESPKGSKKMI KERKKRQRSE  60
SDENMKHPTY RGVRMRNWGK WVCEIREPRK KSRIWLGTYP TAEMAARAHD VAALAIKGNS  120
AYLNFPQLAK QLPKPISTSP KDIQFAAAKA ANNTSFDSQQ HDDSTLFDLP DLFPDGNNGL  180
SSSYSSWNLC AVDTGLIRLD QEPSFWENYN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-17661271173Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004510113.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004510113.11e-157ethylene-responsive transcription factor ERF034
TrEMBLA0A1S2YUE11e-156A0A1S2YUE1_CICAR; ethylene-responsive transcription factor ERF034
STRINGXP_004510113.11e-156(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19234263
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.14e-50ERF family protein