PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004510277.2
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 329aa    MW: 37492 Da    PI: 5.3373
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004510277.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.44.3e-1996146155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++y+GVr+++ +grW+AeIrdp     +   r +lg+f+tae+Aa a+++a+  ++g
  XP_004510277.2  96 CKYRGVRQRP-WGRWAAEIRDP-----KlqIRRWLGTFDTAEDAAMAYDRAAIFYKG 146
                     79********.**********9.....334889*******************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.3E-1296146IPR001471AP2/ERF domain
CDDcd000181.08E-2996152No hitNo description
SuperFamilySSF541712.09E-1997153IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.106.0E-2797152IPR001471AP2/ERF domain
SMARTSM003801.5E-3097160IPR001471AP2/ERF domain
PROSITE profilePS5103222.06297154IPR001471AP2/ERF domain
PRINTSPR003673.2E-1098109IPR001471AP2/ERF domain
PRINTSPR003673.2E-10120136IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MPKVVRITLN DDYATDSSSD EEKYKGNGRR KVKKMVSEIK LIPCSTLSNI DHENNNGNDG  60
DHEGFGKKKK KNNNNNNKMR QRHKPMRHVI TSTNDCKYRG VRQRPWGRWA AEIRDPKLQI  120
RRWLGTFDTA EDAAMAYDRA AIFYKGCDAI TNIIKPPPKP TKLSLAEETS SSMPKLNLTE  180
DFSLLNVSTL NLAGGVSLSE PSLIEDVSLF EMRDVSTFND SSVVVDCDGY KKKEDCKGCS  240
FSSPISVIEF NNERINEQKW ISGVTEENYM DDDFMFVEPN GSSFYEPLLT MVSNESNCIV  300
DIPFHFEDDF ESCKREIDNY FENGPLSKH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A5e-2098152358ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16571GKKKKKN
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004510277.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004510277.30.0ethylene-responsive transcription factor CRF1-like
TrEMBLA0A1S2YUU70.0A0A1S2YUU7_CICAR; ethylene-responsive transcription factor CRF1-like
STRINGXP_004510277.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45034161
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-22cytokinin response factor 4