PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004510857.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family HD-ZIP
Protein Properties Length: 807aa    MW: 88960.1 Da    PI: 6.1868
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004510857.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.24.5e-21117172156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++eLe+lF+++++p++++r eL+k+l L++rqVk+WFqNrR+++k
  XP_004510857.1 117 KKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 172
                     688999***********************************************999 PP
2START210.27.6e-663195431206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela++a++elvk+a+ +ep+W +s     e++n +e++++f++  +     + +ea+r++g+v+ ++  lve+l+d++ +W e+++    + +t+
  XP_004510857.1 319 ELALAAMDELVKMAQTSEPLWIRSIeggrEILNHEEYMRTFTPCIGlrpngFVSEASRETGMVIINSLALVETLMDSN-RWIEMFPciiaRTSTT 412
                     5899**************************************9999********************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     evis+g      galqlm+ael +lsplvp R++ f+R+++q+ +g+w++vdvS+ds ++++  +s+v +++lpSg+++++++ng+skvtwveh+
  XP_004510857.1 413 EVISNGingtrnGALQLMQAELHVLSPLVPvREVNFLRFCKQHAEGVWAVVDVSIDSIRENSGAPSFVNCRKLPSGCVVQDMPNGYSKVTWVEHA 507
                     **************************************************************9******************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     +++++++h+l+r+l++sg+ +ga +wv tlqrqce+
  XP_004510857.1 508 EYEENQVHQLYRPLLSSGMGFGATRWVVTLQRQCEC 543
                     **********************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.54E-20102174IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.609.8E-22106174IPR009057Homeodomain-like
PROSITE profilePS5007117.216114174IPR001356Homeobox domain
SMARTSM003899.9E-18115178IPR001356Homeobox domain
CDDcd000863.63E-18116174No hitNo description
PfamPF000461.4E-18117172IPR001356Homeobox domain
PROSITE patternPS000270149172IPR017970Homeobox, conserved site
PROSITE profilePS5084844.721310546IPR002913START domain
SuperFamilySSF559611.65E-34312543No hitNo description
CDDcd088756.08E-127314542No hitNo description
PfamPF018522.1E-57319543IPR002913START domain
SMARTSM002341.8E-48319543IPR002913START domain
SuperFamilySSF559612.2E-23571800No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009827Biological Processplant-type cell wall modification
GO:0042335Biological Processcuticle development
GO:0043481Biological Processanthocyanin accumulation in tissues in response to UV light
GO:0048765Biological Processroot hair cell differentiation
GO:0008289Molecular Functionlipid binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 807 aa     Download sequence    Send to blast
MSFGGFVENN SGGGSVRNIA AEISYNNNQR MSFGSISHPR LVTTPTLAKS MFNSPGLSLA  60
LQTNIDGQED VNRSMHENFE QNGLRRSREE EQSRSGSDNL DGVSGDEQDA DDKPPRKKRY  120
HRHTPQQIQE LEALFKECPH PDEKQRLELS KRLCLETRQV KFWFQNRRTQ MKTQLERHEN  180
SLLRQENDKL RAENMSIRDA MRNPICSNCG GPAMIGEISL EEQHLRIENA RLKDELDRVC  240
ALAGKFLGRP ISTLPNSSLE LGVGGNNGFN GMNNVSSTLP DFGVGMSNNP LAIVSPSTRQ  300
TTPLVTGFDR SVERSMFLEL ALAAMDELVK MAQTSEPLWI RSIEGGREIL NHEEYMRTFT  360
PCIGLRPNGF VSEASRETGM VIINSLALVE TLMDSNRWIE MFPCIIARTS TTEVISNGIN  420
GTRNGALQLM QAELHVLSPL VPVREVNFLR FCKQHAEGVW AVVDVSIDSI RENSGAPSFV  480
NCRKLPSGCV VQDMPNGYSK VTWVEHAEYE ENQVHQLYRP LLSSGMGFGA TRWVVTLQRQ  540
CECLAILMSS AAPSRDHSAI TAGGRRSMLK LAQRMTNNFC AGVCASTVHK WNKLSPGNVD  600
EDVRVMTRKX XXDPGEPPGI VLSAATSVWL PVSPQRLFDF LRDERLRSEW DILSNGGPMQ  660
EMAHIAKGQD HGNCVSLLRA SAMNSNQSSM LILQETCIDE AGSLVVYAPV DIPAMHVVMN  720
GGDSAYVALL PSGFAVVPDG PGSRGPENET TTNGGETRVS GSLLTVAFQI LVNSLPTAKL  780
TVESVETVNN LISCTVQKIK AALQCES
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in the regulation of the tissue-specific accumulation of anthocyanins and in cellular organization of the primary root. {ECO:0000269|PubMed:10402424}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00421DAPTransfer from AT4G00730Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004510857.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004510857.10.0homeobox-leucine zipper protein ANTHOCYANINLESS 2-like isoform X2
SwissprotQ0WV120.0ANL2_ARATH; Homeobox-leucine zipper protein ANTHOCYANINLESS 2
TrEMBLA0A1S2YW500.0A0A1S2YW50_CICAR; homeobox-leucine zipper protein ANTHOCYANINLESS 2-like isoform X2
STRINGXP_004510857.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]