PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004510907.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family WRKY
Protein Properties Length: 257aa    MW: 30119.8 Da    PI: 8.0747
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004510907.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY67.52e-21106166259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     dD ++WrKYGqK++ +s++ r+YYrCt++   +C+++k+v r +e+p + ++tY g+H+++
  XP_004510907.1 106 DDAHQWRKYGQKKILNSQYLRNYYRCTYKfdqRCQATKQVHRIQENPPLYKTTYYGHHTCH 166
                     8***************************99999**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.1E-2391166IPR003657WRKY domain
SuperFamilySSF1182902.48E-21100166IPR003657WRKY domain
PROSITE profilePS5081118.051100163IPR003657WRKY domain
SMARTSM007741.3E-30105167IPR003657WRKY domain
PfamPF031062.4E-21106166IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
MDDERKAMEE VMGGCEFAKQ LRQVLLNNDN NNELTTTISL AKHLVNKVIN SFNNTLFLLE  60
KHIPSIGPTR SMDFKKSCKS TSTPKGYYQR RKTTQTWENV TKTLTDDAHQ WRKYGQKKIL  120
NSQYLRNYYR CTYKFDQRCQ ATKQVHRIQE NPPLYKTTYY GHHTCHNLLN HDIILHPTSP  180
HDTSSILLSF NNTFPTKQNC HFLSSDSVEC KEKVSSSSLD DYLLFLDPIL DNLEYVSPIS  240
SKLDYDHKDD FQPYDWS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-17100165468OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004510907.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004510907.20.0WRKY DNA-binding transcription factor 70-like
TrEMBLA0A1S2YW900.0A0A1S2YW90_CICAR; WRKY DNA-binding transcription factor 70-like
STRINGXP_004510907.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19953486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-26WRKY DNA-binding protein 70