PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004512430.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family C2H2
Protein Properties Length: 179aa    MW: 19612.2 Da    PI: 4.5184
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004512430.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.41.2e-056787323
                    ETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
                    Cp C+k Fs++     H+r+H
  XP_004512430.1 67 CPECKKEFSTWKAAFGHMRKH 87
                    ********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS0002806787IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048235Biological Processpollen sperm cell differentiation
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MENSSNNSSP QHSPSEGETM LKTPETVLAE LSGGDDGASD SDIEEGEVFK KRKNTQVKNP  60
PSGKPICPEC KKEFSTWKAA FGHMRKHPER THRGFFPPPT FKSNYSSTNI APEGDGDNLS  120
EGVTSIVREL LFDLNRSIYE TEAGSSTNAA PTENQEGKKT KGFDLNELPS SEDDETQDN
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004512430.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004512430.11e-130zinc finger protein ZAT2-like
TrEMBLA0A1S2YZM61e-128A0A1S2YZM6_CICAR; zinc finger protein ZAT2-like
STRINGXP_004512430.11e-129(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF102022128
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35700.19e-18C2H2 family protein