PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004512843.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family GeBP
Protein Properties Length: 231aa    MW: 26923 Da    PI: 10.4377
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004512843.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57368.21.8e-2117105196
          DUF573   1 klfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 
                     klf+r++se+De+v+LqG+     ++ ++ ++d  ++y+++k+++sfk s+ ql eKir+L+ Kf +kvk+    k p f ++hd   ++lskk+
  XP_004512843.1  17 KLFERVFSENDEVVILQGVAA---RKVVNIYSDDAEIYNYFKEKLSFKPSQAQLKEKIRKLRMKFIGKVKN----KLPIFPRQHDLRLYNLSKKV 104
                     579***************864...57778999***************************************....99****************** PP

          DUF573  96 W 96 
                     W
  XP_004512843.1 105 W 105
                     * PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.6E-1919105IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MVKEMKSFEQ GSSSTRKLFE RVFSENDEVV ILQGVAARKV VNIYSDDAEI YNYFKEKLSF  60
KPSQAQLKEK IRKLRMKFIG KVKNKLPIFP RQHDLRLYNL SKKVWIPKTK ELDENGLKNM  120
FESGRKLLNK KTKAEFDERW NKLKLMEIDY LNYRSAFCED LSKTLSSVGS LDRRLLTKRW  180
FYPGQATKAG DLGGNRERKE REGEEAGWSS WLTRQAHDLK IAGSNPAPAM S
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004512843.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC1899472e-93KC189947.1 Vicia faba mitochondrion, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004512843.11e-170probable transcription factor At4g00390
TrEMBLA0A1S2Z0G71e-168A0A1S2Z0G7_CICAR; probable transcription factor At4g00390
STRINGXP_004512843.11e-169(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.16e-17DNA-binding storekeeper protein-related transcriptional regulator