PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004513697.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ARR-B
Protein Properties Length: 612aa    MW: 68299.6 Da    PI: 4.8986
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004513697.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like74.31.7e-23186239155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     kp+l+Wt+ LH+ F+ a++q+ G +kA+Pk+ile+m+++ Lt+e+v+SHLQkYR+
  XP_004513697.1 186 KPKLVWTTYLHNLFLLAIKQI-GLDKAVPKKILEVMNIPNLTRENVASHLQKYRI 239
                     79*******************.********************************6 PP
2Response_reg61.34.9e-21101161107
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     vl+vd +++ +++l+++l   +y +v +a+++ +a++ l++ d  +Dli++ + +pg++G+++ k+ +    ++p+iv++    e+ + + +++G
  XP_004513697.1  10 VLVVDNDDVSLDILANILIAWQY-RVITAKNALDAMQHLRDFDgvFDLIITEVHLPGISGIAFQKHVKDDY-QIPVIVMSNDRRESVICNSYEYG 102
                     89*********************.*******************************************9977.*********************** PP

                     ESEEEESS--HHHH CS
    Response_reg  94 akdflsKpfdpeel 107
                     a  +++Kpf  e+ 
  XP_004513697.1 103 AAHYIMKPFCAEDF 116
                     ********988776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521724.84E-267126IPR011006CheY-like superfamily
SMARTSM004486.0E-188120IPR001789Signal transduction response regulator, receiver domain
Gene3DG3DSA:3.40.50.23001.4E-249151No hitNo description
PROSITE profilePS5011029.9819124IPR001789Signal transduction response regulator, receiver domain
PfamPF000721.2E-1710117IPR001789Signal transduction response regulator, receiver domain
CDDcd001565.58E-2111121No hitNo description
SuperFamilySSF466891.7E-17184243IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.5E-24185243IPR009057Homeodomain-like
TIGRFAMsTIGR015575.8E-23186239IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 612 aa     Download sequence    Send to blast
MECERSNIFV LVVDNDDVSL DILANILIAW QYRVITAKNA LDAMQHLRDF DGVFDLIITE  60
VHLPGISGIA FQKHVKDDYQ IPVIVMSNDR RESVICNSYE YGAAHYIMKP FCAEDFKDIW  120
KIAMDAKKEK LFIENELIIY DQERESFGGD DDVNSLNTLN DAKIKKKYCK RKNDEYQDGD  180
FQVLKKPKLV WTTYLHNLFL LAIKQIGLDK AVPKKILEVM NIPNLTRENV ASHLQKYRIF  240
LRDVAEKGMI GGISHRALRS RFASSLPVSV IKEIQAIRTN KLRAPTLQYL QKLSYQNGDD  300
NNVLQQFNQV SSNNNDQFSF LQKGLTLQEL DQVRIGKSSL ENNVAIQQNK FGISSSSIPT  360
FHQAKNSYND GANGFHGLMN SSSSFLTRGL NNYGNQNYGL RNLNMTSLNN NSNNVLFQKN  420
NIFIPMSNNP FGVQLNNGFG FNVGANNENV NVGGSFGLVQ GGFGLNSVSD VSGGSGSGSG  480
SGSEVPTTFV NAENVAEVNQ FVENVNQNNG AANLISENEF KQMEINVADF LMADDNLNLL  540
NEMDVNRVDA SGLSNADFNF FQDEQPFEQL RGNEGCFNRF MGDKASSAPT STIGTQELDV  600
DLIEALFGAK EN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A9e-20185245464ARR10-B
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004513697.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004513697.10.0putative two-component response regulator ARR13
TrEMBLA0A1S2Z2820.0A0A1S2Z282_CICAR; putative two-component response regulator ARR13
STRINGXP_004513697.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF101422534
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.12e-45response regulator 2