PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004513871.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family C2H2
Protein Properties Length: 167aa    MW: 19407 Da    PI: 9.9267
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004513871.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.000192850123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    +kC+ C+k+F++  +L  H  +H
  XP_004513871.1 28 HKCNLCDKTFNSEKTLDGHKTSH 50
                    79*****************9888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576673.41E-52450No hitNo description
SMARTSM003550.00822850IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.7852855IPR007087Zinc finger, C2H2
PfamPF139121.3E-72852IPR007087Zinc finger, C2H2
PROSITE patternPS0002803050IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
MRKKNPSPSS TYHSRVDNEK TNSSSMMHKC NLCDKTFNSE KTLDGHKTSH RSKLVQPPIK  60
KRWWNDTYDD QQILSAADLT KYSPPRSRET KKRCGKSIID YEAINVAQIL CEISRADHEI  120
LKLSTDIDNQ INNKLVTTVK DNNKSLVVRF KFPKDKKIFQ THHEDCN
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004513871.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004513871.11e-121uncharacterized protein LOC101489273
TrEMBLA0A1S2Z2J01e-120A0A1S2Z2J0_CICAR; uncharacterized protein LOC101489273
STRINGXP_004513871.11e-121(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15177311
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.13e-06salt tolerance zinc finger