PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004514212.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family G2-like
Protein Properties Length: 238aa    MW: 27119.1 Da    PI: 10.2952
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004514212.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like91.95.4e-291370155
         G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkg...LtlehvkSHLQkYRl 55
                    k+rlrWt++LH+rFveav++LGG+++AtPk il+ mk  g   L+++hvkSHLQkYR+
  XP_004514212.1 13 KERLRWTQQLHDRFVEAVNRLGGPDRATPKGILKGMKAMGileLSIYHVKSHLQKYRI 70
                    68******************************876655443339*************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512949.9421073IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.8E-261171IPR009057Homeodomain-like
SuperFamilySSF466891.74E-141270IPR009057Homeodomain-like
TIGRFAMsTIGR015577.6E-221371IPR006447Myb domain, plants
PfamPF002497.7E-81569IPR001005SANT/Myb domain
PfamPF143799.3E-12102140IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MGSTRSHGSS THKERLRWTQ QLHDRFVEAV NRLGGPDRAT PKGILKGMKA MGILELSIYH  60
VKSHLQKYRI SKLIPESTTR GKIEKRSISD ILPNFCSISA LQLKEVLQMQ AEVQKRITDR  120
LEVQKSLKLK IEAQRIYLER FGQSNQRTTI TRKTCKPFVG TSTPLPSLSK DSESLRTQSE  180
EEHQTTIKQK IIDEDVFLTG FELGSSTNQE FYNQTWNLSW SQLAAATCQS PLVPSFIL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A3e-191372258Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B3e-191372258Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A4e-191372157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B4e-191372157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C4e-191372157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D4e-191372157Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A3e-191372258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C3e-191372258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D3e-191372258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F3e-191372258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H3e-191372258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J3e-191372258Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004514212.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004514212.11e-176myb family transcription factor PHL7-like
TrEMBLA0A1S2Z3771e-175A0A1S2Z377_CICAR; myb family transcription factor PHL7-like
STRINGXP_004514212.11e-176(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106592535
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.19e-49G2-like family protein