PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004515377.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 188aa    MW: 20872.4 Da    PI: 9.5329
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004515377.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.97.8e-21112162255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     gy+GVr+++ +g+++AeIrdp+ ng  +r++lg++ tae Aa a+++a+ k++g
  XP_004515377.1 112 GYRGVRRRP-WGKYAAEIRDPKRNG--ARVWLGTYETAENAALAYDQAAFKMRG 162
                     8********.**********98776..*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.7E-23112171IPR016177DNA-binding domain
PfamPF008472.4E-15112162IPR001471AP2/ERF domain
PROSITE profilePS5103224.276112170IPR001471AP2/ERF domain
SMARTSM003803.9E-37112176IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-32113171IPR001471AP2/ERF domain
PRINTSPR003679.9E-14113124IPR001471AP2/ERF domain
CDDcd000189.13E-30113172No hitNo description
PRINTSPR003679.9E-14152172IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    Send to blast
MNTHYSSTNV NSLDQFETST TSSSTPVAPP PFTRSSSFRS LFLAESWAEL PLKEDDTDDM  60
VIYGALSEAA ATTGWCPGRN NVDVAVKIED KGKKSGITEE RVVDAPTNKK LGYRGVRRRP  120
WGKYAAEIRD PKRNGARVWL GTYETAENAA LAYDQAAFKM RGSKAKLNFP HLIDSDYISP  180
TKITRKKC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-30113175668ATERF1
3gcc_A1e-30113175668ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional activator (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004515377.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by ethylene. {ECO:0000269|PubMed:10945353}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004515377.11e-139ethylene-responsive transcription factor 2-like
SwissprotQ9LW505e-50ERF2_NICSY; Ethylene-responsive transcription factor 2
TrEMBLA0A1S2Z5D91e-137A0A1S2Z5D9_CICAR; ethylene-responsive transcription factor 2-like
STRINGXP_004515377.11e-138(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22393382
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.11e-47ethylene-responsive element binding factor 13