PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004515403.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 228aa    MW: 25726.4 Da    PI: 9.8882
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004515403.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.35.3e-202978255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae Aa a++aa+ k++g
  XP_004515403.1 29 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEAAASAYDAAAYKFKG 78
                    8********.**********94....45************************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.96E-212886No hitNo description
Gene3DG3DSA:3.30.730.106.4E-332887IPR001471AP2/ERF domain
PfamPF008474.8E-132978IPR001471AP2/ERF domain
PROSITE profilePS5103225.1722986IPR001471AP2/ERF domain
SMARTSM003801.4E-362992IPR001471AP2/ERF domain
SuperFamilySSF541712.62E-222987IPR016177DNA-binding domain
PRINTSPR003671.3E-113041IPR001471AP2/ERF domain
PRINTSPR003671.3E-115268IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    Send to blast
MKSIISTSEF MERKNQSQPT QQGNEKKKHY RGVRQRPWGK WAAEIRDPKK AARVWLGTFD  60
TAEAAASAYD AAAYKFKGNK AKLNFPQLII NNVDANSDLS PCKNINVSSS SSSSSSQYVP  120
SKNLLFPSSL EEGFPNLMQY VQVLCSKDDE DLRRATSCLY NNNNNNNNNN NNNNNNEQFR  180
YYYNLPPLFS TSSRFPSSTS KDVVVPRVGD CGSSERRNGF HERNPRGS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-252886160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004515403.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0993982e-34BT099398.1 Soybean clone JCVI-FLGm-23J22 unknown mRNA.
GenBankKT0310702e-34KT031070.1 Glycine max clone HN_CCL_192 AP2-EREBP transcription factor (Glyma02g07310.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004515403.11e-168ethylene-responsive transcription factor ERF113-like
TrEMBLA0A1S2Z5E91e-167A0A1S2Z5E9_CICAR; ethylene-responsive transcription factor ERF113-like
STRINGXP_004515403.11e-168(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF98534115
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.11e-31related to AP2 6l